Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs142985453 chr8:13727285 G/A PRHOXNB chr13:28552243-28562774:- 0.7 9.02 3.27E-12 Box Plot
ACC rs143388852 chr2:85690239 G/T PRHOXNB chr13:28552243-28562774:- 0.55 7.51 7.56E-10 Box Plot
ACC rs143407912 chr8:112950907 T/C KRT6C chr12:52862300-52867569:- 0.76 8.99 3.58E-12 Box Plot
ACC rs143526196 chr4:154570648 AT/A PRHOXNB chr13:28552243-28562774:- 0.65 8.51 2.01E-11 Box Plot
ACC rs1435796 chr4:30309242 C/A OR6C3 chr12:55725485-55726420:+ 1.16 10.36 2.99E-14 Box Plot
ACC rs143630987 chr18:37048527 C/T PRHOXNB chr13:28552243-28562774:- 0.79 9.95 1.25E-13 Box Plot
ACC rs143676639 chr13:105086365 TTTTAGGA/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs143678351 chr3:116137336 G/GT OR6C3 chr12:55725485-55726420:+ 0.96 8.39 3.07E-11 Box Plot
ACC rs143788093 chr3:128559565 A/G OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs143987461 chr7:47201808 T/C DRGX chr10:50572226-50604062:- 0.81 8.05 1.07E-10 Box Plot
ACC rs144546984 chr1:48957147 A/AGT PRHOXNB chr13:28552243-28562774:- 0.72 9.61 4.0E-13 Box Plot
ACC rs1447908 chr3:71677250 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.76 3.1E-10 Box Plot
ACC rs144921939 chr17:32519499 AAC/A TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs145008381 chr6:62274274 TTTC/T PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs145065150 chr8:112834697 T/A KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot